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Principles of Quantitative Genetics

  •  Units 5
  •  Lessons 42
  •  No. of Downloads 4661
  •  Course Type Post Graduate
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Syllabus

Mendelian traits vs polygenic traits - nature of quantitative traits and its inheritance - Multiple factor hypothesis - analysis of continuous variation; Variations associated with polygenic traits - phenotypic, genotypic and 16 environmental - non-allelic interactions; Nature of gene action - additive, dominance, epistatic and linkage effects.

Mendelian traits vs. Polygenic traits Nature of quantitative traits and its inheritance

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Genetical Foundations / History of Quantitative Genetics

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Multiple Factor Hypothesis

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Analysis of continuous variation

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Variations associated with polygenic traits – Phenotypic, Genotypic and Environmental Variation; Non allelic interaction

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Nature of gene actions - Additive, dominance, Epistatic and linkage effects

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Syllabus

Principles of Anaylis of Variance (ANOVA) - Expected variance components, random and fixed models; MANOVA, biplot analysis; Comparison of means and variances for significance.

Tests of means and variances for significance

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Principles of analysis of variance

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Fixed and random effects models: single factor ANOVA

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Fixed and random effect models: Two-way and Factorial ANOVA

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MANOVA- Multivariate Analysis of Variance

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Biplot Analysis

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Syllabus

Designs for plant breeding experiments – principles and applications; Genetic diversity analysis – metroglyph, cluster and D2 analyses - Association analysis - phenotypic and genotypic correlations; Path analysis and Parent - progeny regression analysis; Discriminant function and principal component analyses; Selection indices - selection of parents; Simultaneous selection models- concepts of selection - heritability and genetic advance.

Designs for Plant Breeding Experiments : Principles and Applications Part-I

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Designs for Plant Breeding Experiments : Principles and Applications Part-II

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Genetic Diversity Analysis : Metroglyph analysis

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Genetic Diversity Analysis : D2 analysis

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ASSOCIATION ANALYSIS: PHENOTYPIC AND GENOTYPIC CORRELATION

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PATH COEFFICIENT ANALYSIS AND PARENT PROGENY REGRESSION ANALYSIS

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DISCRIMINANT FUNCTION AND SELECTION INDEX

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PRINCIPAL COMPONENT ANALYSIS

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HERITABILITY AND GENETIC ADVANCE PART-I

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HERITABILITY AND GENETIC ADVANCE PART-II

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Syllabus

Generation mean analysis; Mating designs- Diallel, partial diallel, line x tester analysis, NCDs and TTC; Concepts of combining ability and gene action; Analysis of genotype x environment interaction - adaptability and stability; Models for GxE analysis and stability parameters; AMMI analysis – principles and interpretation.

GENERATION MEAN ANALYSIS PART-I

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GENERATION MEAN ANALYSIS PART-II

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MATING DESIGNS AND ITS CLASSIFICATION

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CONCEPT OF COMBINING ABILITY AND GENE ACTION

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DIALLEL MATING DESIGN PART-I HAYMAN APPROACH

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DIALLEL MATING DESIGN PART-II GRIFFING APPROACH

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PARTIAL DIALLEL CROSS

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LINE x TESTER ANALYSIS

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DESIGNS FOR BIPARENTAL CROSS: NCD-I, II, III

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TRIPLE TEST CROSS (TTC) ANALYSIS

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ANALYSIS OF GENOTYPE X ENVIRONMENT INTERACTION: ADAPTABILITY AND STABILITY

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MODELS FOR G X E ANALYSIS AND STABILITY PARAMETERS

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AMMI ANALYSIS: PRINCIPLES AND INTERPRETATIONS

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Syllabus

QTL mapping; Strategies for QTL mapping - desired populations for QTL mapping - statistical methods in QTL mapping - QTL mapping in Genetic analysis; Marker assisted selection (MAS) - Approaches to apply MAS in Plant breeding - selection based on marker - simultaneous selection based on marker and phenotype - factors influencing MAS.

QTL Mapping in Crop Plants

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Desired populations for QTL Mapping

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Mapping major genes/QTL

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QTL mapping for traits controlling by polygenes

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Fine mapping

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Association Mapping

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Marker-assisted Selection (MAS)

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